Statistical tests and statistical learning for omics data

7 - 8 September 2023

Two days, Belval Campus, Luxembourg

This advanced statistics course will include feature selection in statistical tests, clustering and statistical learning methods.

Successful completion with attendance on site will be awarded with 1 ECTS.

Learning objectives:

  • Obtaining an overview of current computational systems biology approaches for omics data analysis
  • Understanding the principles behind data pre-processing, quality control and statistical analysis of large-scale biological datasets
  • Obtaining experience in higher-level omics analysis via pathway and network analyses
  • Learning the basics of machine learning analyses for omics sample clustering and classification

Requirements

  • Basic working knowledge of R
  • Have a computer ready with a recent version of R (4.0 or later) and RStudio (1.2 or later) installed. Please have your computer set-up well before the start of the course.

Thursday (7 Sep. 2023)

TimeTopic
9.15Coffee & get together
9.45Lecture
 Welcome & introduction
 Data pre-processing, filtering & quality control
 Feature selection and hypothesis tests
 Statistical meta-analysis of omics data
12.30Lunch break
13.30Practical tutorial
 Introduction to the example datasets used for the project
 Software installations on student laptops, retrieving public biomedical datasets
 Hands-on data pre-processing & differential abundance analysis
17.00End

Friday (8 Sep. 2023)

TimeTopic
9.15Coffee & get together
9.45Lecture
 Cellular pathway & network analysis
 Unsupervised machine learning analysis (clustering)
 Supervised machine learning analysis (prediction)
12.30Lunch break
13.30Practical tutorial
 Hands-on pathway & network analysis
 Hands-on machine learning analyses
 Conclusion & final discussion
17.00End

Instructors

Enrico Glaab with Veronica Codoni

Registration

Registration is closed.

Address

The workshop will be held at Roudeneck building (BTL) on 4th floor, meeting room E04.020.

University of Luxembourg, Belval campus

1, Boulevard du Jazz

Esch-sur-Alzette

Contact

Veronica Codoni