eTRIKS/ELIXIR-LU data curation training for TranSMART (2016-09-15)


eTRIKS and ELIXIR-Luxembourg Node organize a data preprocessing and curation training that will cover the necessary steps to clean, reformat and upload data to tranSMART.

The training will be divided in the following sections:

  1. Basic introduction of tranSMART (i2b2 tree and database)
  2. Format of standard-format-file that are needed by the ETL scripts
  3. How to setup the data loading environment
  4. How to use the ETL scripts
  5. Hand-on sessions of 2) 3) and 4)


It will be a two-day training with the following approximate schedule:

Day 1: Thursday 15th September – 14:00-17:30

Day 2: Friday 16th September – 09:30-15:00


The venue of the training will be:

LCSB, Université de Luxembourg - Campus Belval, Biotech II

6, Avenue du Swing

L-4362 Esch-sur-Alzette, Luxembourg

See map: Google Maps


Francisco Bonachela-Capdevila